Pseudomonas aeruginosa PAO1, PA1666 (lip2)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IGC Inferred from Genomic Context	ECO:0000317 genomic context evidence used in manual assertion	18524912	Reviewed by curator
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IEA Inferred from Electronic Annotation	ECO:0000203 automatic assertion	18524912	Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF12790	Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113	IPR017734	Type VI secretion system, lipoprotein SciN	34	151	8.6E-41
PANTHER	PTHR37625	OUTER MEMBRANE LIPOPROTEIN-RELATED	IPR017734	Type VI secretion system, lipoprotein SciN	1	157	3.2E-49
Gene3D	G3DSA:2.60.40.4150	Type VI secretion system, lipoprotein SciN	IPR038706	Type VI secretion protein SciN-like superfamily	30	158	1.9E-37
NCBIfam	TIGR03352	JCVI: type VI secretion system lipoprotein TssJ	IPR017734	Type VI secretion system, lipoprotein SciN	10	154	2.7E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.