Pseudomonas aeruginosa PAO1, PA1700 (pcr2)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0030254	protein secretion by the type III secretion system	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	17237176	Reviewed by curator
Biological Process	GO:0030254	protein secretion by the type III secretion system	ISM Inferred from Sequence Model Term mapped from: InterPro:PF05932	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02503	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Type III Secretion		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR02503	JCVI: type III secretion chaperone SycN	IPR012673	Type III secretion system chaperone SycN	4	122	2.8E-47
Gene3D	G3DSA:3.30.1460.10	-	-	-	1	123	1.2E-36
SUPERFAMILY	SSF69635	Type III secretory system chaperone-like	-	-	2	121	6.98E-40
Pfam	PF05932	Tir chaperone protein (CesT) family	IPR010261	Tir chaperone protein (CesT) family	9	113	9.6E-5
CDD	cd17031	T3SC_IA_SycN-like	-	-	4	120	1.51998E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.