Pseudomonas aeruginosa PAO1, PA1785 (nasT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0090352 regulation of nitrate assimilation
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 22493305 Reviewed by curator
Biological Process GO:0031564 transcription antitermination
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 22493305 Reviewed by curator
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01012
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Nitrogen metabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03861 ANTAR domain IPR005561 ANTAR domain 134 184 1.9E-15
SMART SM01012 ANTAR_2 IPR005561 ANTAR domain 129 184 9.6E-19
Gene3D G3DSA:3.40.50.2300 - - - 1 130 9.6E-16
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 184 1.99E-45
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 134 188 3.4E-16
FunFam G3DSA:1.10.10.10:FF:000299 ANTAR domain-containing response regulator - - 134 188 2.3E-28
PANTHER PTHR43367 - - - 2 122 8.2E-14
PIRSF PIRSF036382 RR_antiterminator IPR008327 Signal transduction response regulator, antiterminator 1 191 2.7E-66
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 4 110 5.1E-9
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2 113 2.6E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.