Pseudomonas aeruginosa PAO1, PA1811 (nppA1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0035673 oligopeptide transmembrane transporter activity
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 23979749 Reviewed by curator
Biological Process GO:0006857 oligopeptide transport
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 23979749 Reviewed by curator
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30290 PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER IPR039424 Solute-binding protein family 5 1 601 5.8E-77
Gene3D G3DSA:3.40.190.10 - - - 26 601 0.0
CDD cd08497 PBP2_NikA_DppA_OppA_like_14 - - 38 587 0.0
Gene3D G3DSA:3.10.105.10 - - - 323 581 0.0
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 48 603 3.26E-115
PIRSF PIRSF002741 MppA IPR030678 Peptide/nickel binding protein, MppA-type 1 606 3.7E-98
FunFam G3DSA:3.10.105.10:FF:000005 ABC transporter substrate-binding protein - - 323 581 2.1E-109
Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IPR000914 Solute-binding protein family 5 domain 113 517 3.0E-67

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.