Pseudomonas aeruginosa PAO1, PA1851
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 2010911 | 2010923 | - |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| Shine-Dalgarno sequence | 2010991 | 2010994 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GGCGCGCGGCG-N12-CGCCGCGCGCC | 2011891 | 2011924 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAAGGCGCCC-N2-GGGCGCCTTT | 2012217 | 2012238 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 482 | 2012212 | 2012243 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 484 | 2012220 | 2012235 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 2012541 | 2012543 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |