Pseudomonas aeruginosa PAO1, PA1973 (pqqF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0051188 obsolete cofactor biosynthetic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0008237 metallopeptidase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: RefSeq:YP_002963390.1
 ECO:0000250
sequence similarity evidence used in manual assertion		 8606199 Reviewed by curator
Cellular Component GO:0042597 periplasmic space
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: RefSeq:YP_002963390.1
 ECO:0000250
sequence similarity evidence used in manual assertion		 8606199 Reviewed by curator
Biological Process GO:0018189 pyrroloquinoline quinone biosynthetic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 7665488 Reviewed by curator
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004222 metalloendopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0018189 pyrroloquinoline quinone biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF63411
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Pyrroloquinoline quinone biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF63411 LuxS/MPP-like metallohydrolase IPR011249 Metalloenzyme, LuxS/M16 peptidase-like 12 218 4.68E-35
Gene3D G3DSA:3.30.830.10 - - - 2 228 6.1E-50
Pfam PF05193 Peptidase M16 inactive domain IPR007863 Peptidase M16, C-terminal 184 341 7.0E-12
Gene3D G3DSA:3.30.830.10 - - - 593 770 2.5E-20
SUPERFAMILY SSF63411 LuxS/MPP-like metallohydrolase IPR011249 Metalloenzyme, LuxS/M16 peptidase-like 591 768 1.15E-18
Pfam PF00675 Insulinase (Peptidase family M16) IPR011765 Peptidase M16, N-terminal 24 144 1.5E-25
NCBIfam TIGR02110 JCVI: pyrroloquinoline quinone biosynthesis protein PqqF IPR011844 Coenzyme PQQ biosynthesis protein PqqF 12 688 0.0
PANTHER PTHR43690 NARDILYSIN - - 633 730 2.3E-50

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.