Pseudomonas aeruginosa PAO1, PA2001 (atoB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008137 NADH dehydrogenase (ubiquinone) activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0008152 metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0044255 cellular lipid metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00751
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016746 transferase activity, transferring acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.47.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Fatty acid and phospholipid metabolism Other PAO1 genes in this class
Central intermediary metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00640 Propanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc TRYPTOPHAN-DEGRADATION-1 L-tryptophan degradation III (eukaryotic) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCAP Pyruvate metabolism ECO:0000037
not_recorded
PseudoCAP Tryptophan metabolism ECO:0000037
not_recorded
KEGG pae00900 Terpenoid backbone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00072 Synthesis and degradation of ketone bodies 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Fatty acid metabolism ECO:0000037
not_recorded
PseudoCyc PWY-5177 glutaryl-CoA degradation 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCyc PWYB-96 Carnitine Catabolism to Glycine Betaine 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCAP Lysine degradation ECO:0000037
not_recorded
PseudoCAP Fatty acid biosynthesis (path 2) ECO:0000037
not_recorded
KEGG pae00310 Lysine degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Propanoate metabolism ECO:0000037
not_recorded
KEGG pae00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00280 Valine, leucine and isoleucine degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00071 Fatty acid degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Butanoate metabolism ECO:0000037
not_recorded
KEGG pae00650 Butanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00380 Tryptophan metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00620 Pyruvate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01212 Fatty acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01930 JCVI: acetyl-CoA C-acyltransferase IPR002155 Thiolase 6 390 0.0
FunFam G3DSA:3.40.47.10:FF:000010 Acetyl-CoA acetyltransferase (Thiolase) - - 1 392 0.0
PANTHER PTHR18919 ACETYL-COA C-ACYLTRANSFERASE - - 1 391 0.0
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 272 390 1.64E-43
Pfam PF00108 Thiolase, N-terminal domain IPR020616 Thiolase, N-terminal 4 262 1.4E-106
PIRSF PIRSF000429 Ac-CoA_Ac_transf IPR002155 Thiolase 1 392 0.0
Pfam PF02803 Thiolase, C-terminal domain IPR020617 Thiolase, C-terminal 271 390 4.3E-51
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 4 276 0.0
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 3 270 7.2E-93
CDD cd00751 thiolase IPR002155 Thiolase 5 392 0.0
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 126 389 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.