Pseudomonas aeruginosa PAO1, PA2227 (vqsM)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0043902	positive regulation of multi-organism process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	16194239	Reviewed by curator
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00342	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0043565	sequence-specific DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00342	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00342	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF12833	Helix-turn-helix domain	IPR018060	DNA binding HTH domain, AraC-type	246	322	9.1E-15
Gene3D	G3DSA:1.10.10.60	-	-	-	222	324	5.8E-18
PANTHER	PTHR47894	HTH-TYPE TRANSCRIPTIONAL REGULATOR GADX	-	-	1	324	2.4E-79
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	275	324	4.48E-9
SMART	SM00342	aracneu4	IPR018060	DNA binding HTH domain, AraC-type	239	321	1.7E-16
Pfam	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term	IPR032687	HTH-type transcriptional regulator AraC-type, N-terminal	53	193	3.7E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.