Pseudomonas aeruginosa PAO1, PA2523 (czcR)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:1900233	positive regulation of single-species biofilm formation on inanimate substrate	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	22666466	Reviewed by curator
Molecular Function	GO:0000156	phosphorelay response regulator activity	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	10570969	Reviewed by curator
Biological Process	GO:0043902	positive regulation of multi-organism process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	22666466	Reviewed by curator
Biological Process	GO:0032411	positive regulation of transporter activity	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	14679195	Reviewed by curator
Biological Process	GO:0045862	positive regulation of proteolysis	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	22666466	Reviewed by curator
Biological Process	GO:1900377	negative regulation of secondary metabolite biosynthetic process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	22666466	Reviewed by curator
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00383	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00383	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00383	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other PAO1 genes in this class Transcriptional regulators Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Two-component System		ECO:0000037 not_recorded
KEGG	pae02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR48111	REGULATOR OF RPOS	IPR039420	Transcriptional regulatory protein WalR-like	1	222	1.0E-56
CDD	cd00383	trans_reg_C	IPR001867	OmpR/PhoB-type DNA-binding domain	132	220	4.11401E-31
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	1	111	8.1E-40
SUPERFAMILY	SSF46894	C-terminal effector domain of the bipartite response regulators	IPR016032	Signal transduction response regulator, C-terminal effector	124	221	2.04E-28
CDD	cd19935	REC_OmpR_CusR-like	-	-	3	101	6.60509E-53
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	117	224	1.6E-30
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	1	121	6.12E-38
FunFam	G3DSA:1.10.10.10:FF:000005	Two-component system response regulator	-	-	121	223	1.1E-35
NCBIfam	TIGR01387	JCVI: heavy metal response regulator transcription factor	IPR006291	Transcriptional regulatory protein CusR-like, heavy metal response	3	220	4.1E-101
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	3	112	2.3E-26
Pfam	PF00486	Transcriptional regulatory protein, C terminal	IPR001867	OmpR/PhoB-type DNA-binding domain	148	220	2.6E-25
Gene3D	G3DSA:3.40.50.2300	-	-	-	1	86	4.2E-19
SMART	SM00862	Trans_reg_C_3	IPR001867	OmpR/PhoB-type DNA-binding domain	145	220	6.0E-23
Gene3D	G3DSA:6.10.250.690	-	-	-	87	116	4.4E-16
FunFam	G3DSA:3.40.50.2300:FF:000001	DNA-binding response regulator PhoB	-	-	1	79	3.6E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.