Pseudomonas aeruginosa PAO1, PA2665 (fhpR )

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008134 transcription factor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02954
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class
Adaptation, Protection Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR32071 TRANSCRIPTIONAL REGULATORY PROTEIN - - 152 516 4.5E-122
FunFam G3DSA:3.40.50.300:FF:000006 DNA-binding transcriptional regulator NtrC - - 187 364 2.9E-76
Pfam PF02954 Bacterial regulatory protein, Fis family IPR002197 DNA binding HTH domain, Fis-type 479 509 6.2E-5
SMART SM00065 gaf_1 IPR003018 GAF domain 22 170 1.5E-9
CDD cd00009 AAA - - 195 356 1.56474E-25
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 193 429 1.25E-70
Gene3D G3DSA:1.10.8.60 - - - 365 443 6.2E-19
Pfam PF01590 GAF domain IPR003018 GAF domain 25 159 2.7E-9
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 464 516 2.42E-7
SUPERFAMILY SSF55781 GAF domain-like - - 24 172 1.22E-16
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 3 176 2.9E-19
Gene3D G3DSA:1.10.10.60 - - - 465 517 3.8E-9
Coils Coil Coil - - 166 186 -
Pfam PF00158 Sigma-54 interaction domain IPR002078 RNA polymerase sigma factor 54 interaction domain 194 360 7.3E-69
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 214 357 1.6E-11
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 181 364 8.0E-67
MobiDBLite mobidb-lite consensus disorder prediction - - 445 468 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.