Pseudomonas aeruginosa PAO1, PA2684 (tse5)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	24589350	Reviewed by curator
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	24794869	Reviewed by curator
Biological Process	GO:0009405	pathogenesis	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	24794869	Reviewed by curator
Molecular Function	GO:0097351	toxin-antitoxin pair type II binding	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	24794869	Reviewed by curator
Biological Process	GO:0009405	pathogenesis	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	24589350	Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1112	1132	3.0E-15
Gene3D	G3DSA:2.180.10.10	-	-	-	629	1167	1.3E-77
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	636	669	1.5E-6
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	594	634	7.1E-7
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	489	524	4.9E-8
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	531	566	1.3E-6
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	489	528	2.0E-6
NCBIfam	TIGR03696	JCVI: RHS repeat-associated core domain	IPR022385	Rhs repeat-associated core	1105	1168	3.6E-23
Pfam	PF03527	RHS protein	IPR001826	RHS protein	1065	1102	4.3E-15
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	636	670	4.9E-6
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	367	399	2.6E-4
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	531	570	1.9E-7
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1135	1154	3.0E-15
SUPERFAMILY	SSF69304	Tricorn protease N-terminal domain	-	-	496	701	1.1E-5
Coils	Coil	Coil	-	-	416	436	-
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	927	965	7.5E-5
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	595	630	3.2E-6
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1059	1079	3.0E-15
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	395	419	-
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	381	415	3.4E-4
PANTHER	PTHR32305	-	-	-	22	1301	2.1E-69
Gene3D	G3DSA:2.180.10.10	-	-	-	181	628	4.1E-39
Pfam	PF20148	Domain of unknown function (DUF6531)	IPR045351	Domain of unknown function DUF6531	46	120	8.7E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.