Pseudomonas aeruginosa PAO1, PA2944 (cobN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0051188 obsolete cofactor biosynthetic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02257
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02514
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051116 cobaltochelatase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02257
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Cobalamin biosynthesis ECO:0000037
not_recorded
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc PWY-7376 cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCyc P381-PWY adenosylcobalamin biosynthesis II (late cobalt incorporation) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02514 CobN/Magnesium Chelatase IPR003672 CobN/magnesium chelatase 138 1231 0.0
Coils Coil Coil - - 1066 1086 -
NCBIfam TIGR02257 JCVI: cobaltochelatase subunit CobN IPR011953 Cobaltochelatase, CobN subunit 1 1246 0.0
CDD cd10150 CobN_like IPR003672 CobN/magnesium chelatase 57 1123 0.0
PANTHER PTHR44119 MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC IPR003672 CobN/magnesium chelatase 136 1247 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.