Pseudomonas aeruginosa PAO1, PA3059 (pelF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044010 single-species biofilm formation
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 23435893 Reviewed by curator
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 23435893 Reviewed by curator
Biological Process GO:0045226 extracellular polysaccharide biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 23435893 Reviewed by curator
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: CAZy:GT4
 ECO:0000250
sequence similarity evidence used in manual assertion		 18838391 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13692 Glycosyl transferases group 1 - - 318 468 8.4E-22
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 27 310 1.3E-8
PANTHER PTHR12526 GLYCOSYLTRANSFERASE - - 14 499 1.7E-39
NCBIfam NF038011 NCBIFAM: GT4 family glycosyltransferase PelF IPR047691 GT4 family glycosyltransferase PelF-like 13 500 0.0
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 311 488 3.4E-34
Pfam PF11997 Domain of unknown function (DUF3492) IPR022622 Domain of unknown function DUF3492 12 290 1.8E-90
CDD cd03813 GT4-like - - 13 501 0.0
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase - - 16 502 3.84E-59

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.