Pseudomonas aeruginosa PAO1, PA3064 (pelA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0045226	extracellular polysaccharide biosynthetic process	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	23504011	Reviewed by curator
Molecular Function	GO:0019213	deacetylase activity	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	23504011	Reviewed by curator
Biological Process	GO:0044010	single-species biofilm formation	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	23504011	Reviewed by curator
Biological Process	GO:0005975	carbohydrate metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF88713	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01545	Thermotoga maritima hypothetical protein TM1410 signature	IPR016062	Hypothetical protein TM1410-related	90	109	1.8E-6
PRINTS	PR01545	Thermotoga maritima hypothetical protein TM1410 signature	IPR016062	Hypothetical protein TM1410-related	253	263	1.8E-6
Pfam	PF03537	Glycoside-hydrolase family GH114	IPR004352	Glycoside-hydrolase family GH114, TIM-barrel domain	73	291	3.5E-16
PRINTS	PR01545	Thermotoga maritima hypothetical protein TM1410 signature	IPR016062	Hypothetical protein TM1410-related	147	166	1.8E-6
PIRSF	PIRSF029570	UCP029570	IPR016925	Uncharacterised conserved protein UCP029570	5	948	0.0
PRINTS	PR01545	Thermotoga maritima hypothetical protein TM1410 signature	IPR016062	Hypothetical protein TM1410-related	275	287	1.8E-6
Gene3D	G3DSA:3.20.20.70	Aldolase class I	IPR013785	Aldolase-type TIM barrel	53	311	8.2E-42
SUPERFAMILY	SSF88713	Glycoside hydrolase/deacetylase	IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel	570	787	1.75E-6
PANTHER	PTHR35882	PELA	-	-	20	946	0.0
SUPERFAMILY	SSF51445	(Trans)glycosidases	IPR017853	Glycoside hydrolase superfamily	52	305	5.9E-36
CDD	cd10922	CE4_PelA_like_C	-	-	518	784	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.