Pseudomonas aeruginosa PAO1, PA3096 (xcpY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 9818381 Reviewed by curator
Cellular Component GO:0015627 type II protein secretion system complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 16168578 Reviewed by curator
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01709
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01709
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01709
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.420.380 - - - 6 163 7.9E-28
PIRSF PIRSF015761 Protein_L IPR007812 Type II secretion system protein GspL 35 382 2.3E-49
SUPERFAMILY SSF53067 Actin-like ATPase domain IPR043129 ATPase, nucleotide binding domain 6 139 5.31E-26
Pfam PF12693 GspL periplasmic domain IPR025691 GspL periplasmic domain 226 381 3.7E-46
Pfam PF05134 Type II secretion system (T2SS), protein L IPR024230 GspL, cytoplasmic actin-ATPase-like domain 7 222 5.8E-57
NCBIfam TIGR01709 JCVI: type II secretion system protein GspL IPR007812 Type II secretion system protein GspL 17 376 5.7E-76
Gene3D G3DSA:3.30.1360.100 General secretion pathway protein M, EpsM - - 297 382 2.2E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.