Pseudomonas aeruginosa PAO1, PA3115 (fimV)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Molecular Function GO:0042834 peptidoglycan binding
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 21097635 Reviewed by curator
Cellular Component GO:0044096 type IV pilus
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 21097635 Reviewed by curator
Cellular Component GO:0015627 type II protein secretion system complex
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 21527471 Reviewed by curator
Biological Process GO:0006928 movement of cell or subcellular component
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.10.350.10 LysM domain IPR036779 LysM domain superfamily 163 238 1.6E-10
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 547 626 3.9E-6
PANTHER PTHR18898 NUCLEOPROTEIN TPR-RELATED - - 327 898 8.4E-10
CDD cd00118 LysM IPR018392 LysM domain 175 229 3.23679E-6
MobiDBLite mobidb-lite consensus disorder prediction - - 237 312 -
MobiDBLite mobidb-lite consensus disorder prediction - - 269 283 -
SMART SM00257 LysM_2 IPR018392 LysM domain 175 230 0.0037
SUPERFAMILY SSF48452 TPR-like IPR011990 Tetratricopeptide-like helical domain superfamily 551 607 2.85E-5
MobiDBLite mobidb-lite consensus disorder prediction - - 380 394 -
MobiDBLite mobidb-lite consensus disorder prediction - - 785 816 -
Gene3D G3DSA:1.20.58.2200 - IPR038440 FimV, C-terminal domain superfamily 858 919 1.9E-27
NCBIfam TIGR03505 JCVI: FimV/HubP N-terminal domain IPR020012 Motility protein FimV, N-terminal 182 254 4.0E-30
MobiDBLite mobidb-lite consensus disorder prediction - - 237 259 -
MobiDBLite mobidb-lite consensus disorder prediction - - 411 445 -
Coils Coil Coil - - 319 367 -
MobiDBLite mobidb-lite consensus disorder prediction - - 372 445 -
Coils Coil Coil - - 904 919 -
NCBIfam TIGR03504 JCVI: FimV/HubP C-terminal domain IPR020011 Motility protein FimV, C-terminal 875 918 6.6E-21
MobiDBLite mobidb-lite consensus disorder prediction - - 140 177 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.