Pseudomonas aeruginosa PAO1, PA3169

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044249 cellular biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00512
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0044237 cellular metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01008
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00270 Cysteine and methionine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
UniPathway UPA00904 L-methionine biosynthesis via salvage pathway InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00270 Cysteine and methionine metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01008 Initiation factor 2 subunit family IPR000649 Initiation factor 2B-related 53 341 3.4E-74
TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase IPR005251 Methylthioribose-1-phosphate isomerase 12 341 2.7E-141
TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins IPR011559 Initiation factor 2B alpha/beta/delta 41 341 1.4E-106
Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. IPR005251 Methylthioribose-1-phosphate isomerase 10 352 40.114
Gene3D G3DSA:3.40.50.10470 149 357 1.8E-66
SUPERFAMILY SSF100950 9 347 1.17E-114
Gene3D G3DSA:1.20.120.420 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain 11 148 3.8E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.