Pseudomonas aeruginosa PAO1, PA3257 (algO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042493 response to drug
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 1447154 Reviewed by curator
Biological Process GO:0007165 signal transduction
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 24373018 Reviewed by curator
Molecular Function GO:0004252 serine-type endopeptidase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PP_1719
 ECO:0000250
sequence similarity evidence used in manual assertion		 24373018 Reviewed by curator
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0008236 serine-type peptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00245
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00595
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00245
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 657 687 -
Gene3D G3DSA:3.90.226.10 - - - 362 553 8.6E-80
FunFam G3DSA:3.90.226.10:FF:000090 Tail-specific protease - - 346 575 1.4E-77
Pfam PF17804 Tail specific protease N-terminal domain IPR040573 Tail specific protease, N-terminal domain 63 250 1.9E-65
Pfam PF03572 Peptidase family S41 IPR005151 Tail specific protease 381 554 1.9E-51
Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) IPR020992 Tail specific protease, C-terminal 560 700 6.9E-37
SMART SM00245 tsp_4 IPR005151 Tail specific protease 347 556 3.1E-56
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 255 339 4.03E-9
CDD cd07560 Peptidase_S41_CPP IPR004447 C-terminal-processing peptidase S41A 381 553 6.37776E-72
Pfam PF00595 PDZ domain IPR001478 PDZ domain 257 337 1.2E-9
Gene3D G3DSA:3.30.750.44 - - - 188 531 8.6E-80
SUPERFAMILY SSF52096 ClpP/crotonase IPR029045 ClpP/crotonase-like domain superfamily 199 560 2.15E-69
FunFam G3DSA:3.30.750.44:FF:000007 Periplasmic tail-specific protease - - 187 273 2.7E-41
CDD cd00988 PDZ_CTP_protease - - 263 348 6.62996E-13
SMART SM00228 pdz_new IPR001478 PDZ domain 264 341 6.7E-5
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 264 361 8.6E-80
Coils Coil Coil - - 206 226 -
MobiDBLite mobidb-lite consensus disorder prediction - - 654 687 -
PANTHER PTHR32060 TAIL-SPECIFIC PROTEASE - - 168 579 2.1E-75
NCBIfam TIGR00225 JCVI: C-terminal processing peptidase IPR004447 C-terminal-processing peptidase S41A 221 576 1.2E-95
Coils Coil Coil - - 617 651 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.