Pseudomonas aeruginosa PAO1, PA3337 (rfaD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006000 fructose metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0006013 mannose metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0004462 lactoylglutathione lyase activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0050661 NADP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01601
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01601
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008712 ADP-glyceromanno-heptose 6-epimerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01601
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Fructose and mannose metabolism ECO:0000037
not_recorded
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00540 Lipopolysaccharide biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase 4 331 48.013237
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 1 328 6.16E-57
NCBIfam TIGR02197 JCVI: ADP-glyceromanno-heptose 6-epimerase IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase 5 330 1.6E-130
CDD cd05248 ADP_GME_SDR_e IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase 5 328 0.0
PANTHER PTHR43103 NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE - - 3 330 7.3E-54
Gene3D G3DSA:3.90.25.10 - - - 169 311 2.8E-128
Pfam PF01370 NAD dependent epimerase/dehydratase family IPR001509 NAD-dependent epimerase/dehydratase 5 243 3.1E-41
Gene3D G3DSA:3.40.50.720 - - - 6 324 2.8E-128

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.