Pseudomonas aeruginosa PAO1, PA3349

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PAO1 genes in this class
Chemotaxis Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Chemotaxis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.2300 - - - 178 309 2.4E-25
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 181 300 9.2E-17
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 16 156 5.75E-35
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 179 303 1.71E-24
PIRSF PIRSF002867 CheV IPR024181 Chemotaxis response regulator CheV 1 308 2.0E-108
CDD cd19924 REC_CheV-like - - 181 291 1.19659E-56
SMART SM00260 chew_2 IPR002545 CheW-like domain 17 153 4.0E-20
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 21 156 1.8E-33
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 24 147 5.3E-27
Gene3D G3DSA:2.40.50.180 - - - 41 148 5.3E-27
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 179 300 1.7E-18
PANTHER PTHR47233 CHEMOTAXIS PROTEIN CHEV - - 1 307 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.