Pseudomonas aeruginosa PAO1, PA3351 (flgM)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016989	sigma factor antagonist activity	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	11872701	Reviewed by curator
Biological Process	GO:0045892	negative regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR03824	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae02040	Flagellar assembly	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF04316	Anti-sigma-28 factor, FlgM	IPR031316	Anti-sigma-28 factor FlgM, C-terminal	49	102	1.3E-20
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	1	52	-
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	9	24	-
NCBIfam	TIGR03824	JCVI: flagellar biosynthesis anti-sigma factor FlgM	IPR007412	Anti-sigma-28 factor, FlgM	5	104	4.9E-26
SUPERFAMILY	SSF101498	Anti-sigma factor FlgM	IPR035890	Anti-sigma-28 factor FlgM superfamily	5	104	1.02E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.