Pseudomonas aeruginosa PAO1, PA3450 (lsfA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| OxyR binding site | 3856193 | 3856207 | + |
ECO:0000314
direct assay evidence used in manual assertion |
7635828 | Details |
| OxyR binding site | 3856394 | 3856408 | + |
ECO:0000314
direct assay evidence used in manual assertion |
22275523 | Details |
| Inverted repeat: GGCAGGTATTC-N79-GAATACCTGCC | 3856602 | 3856702 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCCGGTTTCG-N64-CGAAACCGGC | 3855305 | 3855388 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GTCCCGCCTGC-N13-GCAGGCGGGAC | 3855448 | 3855482 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 868 | 3855336 | 3855350 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 871 | 3855447 | 3855483 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |