Pseudomonas aeruginosa PAO1, PA3476 (rhlI)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| transcriptional initiation site (+1) | 3889844 | 3889844 | - |
|
10570171 | Details |
| -10 region | 3889854 | 3889859 | - |
|
10570171 | Details |
| -35 region | 3889874 | 3889879 | - |
|
10570171 | Details |
| las-box-like sequence (lasR binding site) | 3889879 | 3889898 | - |
|
10570171 | Details |
| AlgR binding site | 3889863 | 3889872 | - |
|
17766417 | Details |
| LasR binding site | 3889881 | 3889899 | - |
ECO:0000314
direct assay evidence used in manual assertion |
12076794 | Details |
| AlgR binding site | 3889859 | 3889878 | - |
ECO:0000314
direct assay evidence used in manual assertion |
17766417 | Details |
| RpoN binding site | 3889872 | 3889888 | - |
ECO:0000314
direct assay evidence used in manual assertion |
19445690 | Details |
| Inverted repeat: AGGGCGCGCCG-N2-CGGCGCGCCCT | 3889896 | 3889919 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 3889752 | 3889754 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |