Pseudomonas aeruginosa PAO1, PA3531 (bfrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Fur box | 3949790 | 3949808 | + |
|
12207696 | Details |
| Fur binding site | 3949791 | 3949809 | - |
ECO:0000314
direct assay evidence used in manual assertion |
12207696 | Details |
| Rho-independent transcription terminator TERM 899 | 3950105 | 3950121 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 3950274 | 3950277 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAGCGCCGGCGG-N6-CCGCCGGCGCTT | 3950776 | 3950805 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGGCCTGCGC-N62-GCGCAGGCCG | 3950839 | 3950920 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 900 | 3950778 | 3950803 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 901 | 3950778 | 3950803 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |