Pseudomonas aeruginosa PAO1, PA3623
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | IPR018392 | LysM domain | 69 | 110 | 1.77352E-12 |
| Pfam | PF01476 | LysM domain | IPR018392 | LysM domain | 69 | 109 | 2.8E-13 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 134 | 158 | - |
| Pfam | PF01551 | Peptidase family M23 | IPR016047 | Peptidase M23 | 197 | 290 | 3.1E-30 |
| SUPERFAMILY | SSF51261 | Duplicated hybrid motif | IPR011055 | Duplicated hybrid motif | 68 | 294 | 8.89E-53 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | IPR036779 | LysM domain superfamily | 68 | 110 | 1.9E-13 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 134 | 168 | - |
| SMART | SM00257 | LysM_2 | IPR018392 | LysM domain | 68 | 112 | 1.9E-11 |
| FunFam | G3DSA:3.10.350.10:FF:000006 | YgeR family lipoprotein | - | - | 67 | 107 | 3.2E-23 |
| Gene3D | G3DSA:2.70.70.10 | Glucose Permease (Domain IIA) | IPR011055 | Duplicated hybrid motif | 152 | 295 | 7.2E-38 |
| CDD | cd12797 | M23_peptidase | - | - | 197 | 281 | 2.87831E-28 |
| FunFam | G3DSA:2.70.70.10:FF:000010 | M23 family peptidase | - | - | 148 | 295 | 7.3E-54 |
| PANTHER | PTHR21666 | PEPTIDASE-RELATED | - | - | 99 | 294 | 2.8E-35 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.