Pseudomonas aeruginosa PAO1, PA3648 (opr86)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0009279 | cell outer membrane |
Inferred from Sequence Alignment
Term mapped from: UniProtKB:Q9K1H0
|
ECO:0000247 sequence alignment evidence used in manual assertion |
12522254 | Reviewed by curator |
| Cellular Component | GO:1990063 | Bam protein complex |
Inferred from Sequence Alignment
Term mapped from: UniProtKB:Q9K1H0
|
ECO:0000247 sequence alignment evidence used in manual assertion |
12522254 | Reviewed by curator |
| Biological Process | GO:0071709 | membrane assembly |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006076
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0019867 | outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF07244
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07244 | Surface antigen variable number repeat | IPR010827 | POTRA domain, BamA/TamA-like | 175 | 262 | 7.2E-17 |
| FunFam | G3DSA:3.10.20.310:FF:000002 | Outer membrane protein assembly factor BamA | - | - | 174 | 263 | 4.6E-42 |
| FunFam | G3DSA:3.10.20.310:FF:000015 | Outer membrane protein assembly factor BamA | - | - | 91 | 172 | 8.3E-40 |
| Gene3D | G3DSA:2.40.160.50 | membrane protein fhac: a member of the omp85/tpsb transporter family | - | - | 422 | 797 | 2.1E-97 |
| Pfam | PF07244 | Surface antigen variable number repeat | IPR010827 | POTRA domain, BamA/TamA-like | 265 | 343 | 4.0E-15 |
| Pfam | PF07244 | Surface antigen variable number repeat | IPR010827 | POTRA domain, BamA/TamA-like | 347 | 419 | 9.4E-16 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 658 | 694 | - |
| Pfam | PF07244 | Surface antigen variable number repeat | IPR010827 | POTRA domain, BamA/TamA-like | 92 | 171 | 2.2E-13 |
| Pfam | PF01103 | Omp85 superfamily domain | IPR000184 | Bacterial surface antigen (D15) | 447 | 797 | 1.0E-96 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 658 | 676 | - |
| Gene3D | G3DSA:3.10.20.310 | membrane protein fhac | - | - | 91 | 172 | 1.5E-19 |
| Gene3D | G3DSA:3.10.20.310 | membrane protein fhac | - | - | 17 | 90 | 2.6E-19 |
| Gene3D | G3DSA:3.10.20.310 | membrane protein fhac | - | - | 266 | 345 | 1.5E-18 |
| NCBIfam | TIGR03303 | JCVI: outer membrane protein assembly factor BamA | IPR023707 | Outer membrane protein assembly factor BamA | 23 | 797 | 0.0 |
| FunFam | G3DSA:3.10.20.310:FF:000001 | Outer membrane protein assembly factor BamA | - | - | 346 | 422 | 1.3E-39 |
| PANTHER | PTHR12815 | SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER | IPR039910 | Surface antigen D15-like | 137 | 794 | 3.7E-49 |
| FunFam | G3DSA:3.10.20.310:FF:000003 | Outer membrane protein assembly factor BamA | - | - | 18 | 90 | 2.6E-30 |
| Hamap | MF_01430 | Outer membrane protein assembly factor BamA [bamA]. | IPR023707 | Outer membrane protein assembly factor BamA | 1 | 797 | 25.942677 |
| Gene3D | G3DSA:3.10.20.310 | membrane protein fhac | - | - | 175 | 265 | 9.5E-24 |
| PIRSF | PIRSF006076 | Omp85 | IPR023707 | Outer membrane protein assembly factor BamA | 1 | 797 | 0.0 |
| Gene3D | G3DSA:3.10.20.310 | membrane protein fhac | - | - | 346 | 420 | 5.7E-25 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.