Pseudomonas aeruginosa PAO1, PA3652 (uppS)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0008689	3-demethylubiquinone-9 3-O-methyltransferase activity	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0051188	obsolete cofactor biosynthetic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Cellular Component	GO:0009276	Gram-negative-bacterium-type cell wall	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Molecular Function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01255	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae01110	Biosynthesis of secondary metabolites	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae00900	Terpenoid backbone biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.40.1180.10:FF:000001	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	-	-	1	239	1.1E-101
NCBIfam	TIGR00055	JCVI: polyprenyl diphosphate synthase	IPR001441	Decaprenyl diphosphate synthase-like	10	237	2.2E-90
SUPERFAMILY	SSF64005	Undecaprenyl diphosphate synthase	IPR036424	Decaprenyl diphosphate synthase-like superfamily	10	233	2.75E-84
Gene3D	G3DSA:3.40.1180.10	-	IPR036424	Decaprenyl diphosphate synthase-like superfamily	1	239	3.4E-94
Hamap	MF_01139	Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS].	IPR001441	Decaprenyl diphosphate synthase-like	10	238	39.247303
Pfam	PF01255	Putative undecaprenyl diphosphate synthase	IPR001441	Decaprenyl diphosphate synthase-like	17	237	1.3E-75
CDD	cd00475	Cis_IPPS	IPR001441	Decaprenyl diphosphate synthase-like	13	231	4.96238E-130
PANTHER	PTHR10291	DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER	IPR001441	Decaprenyl diphosphate synthase-like	10	238	1.0E-78

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.