Pseudomonas aeruginosa PAO1, PA3655 (tsf)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003746 translation elongation factor activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 8596629 Reviewed by curator
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46934
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006414 translational elongation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00050
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003746 translation elongation factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00050
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00050 Elongation factor Ts [tsf]. IPR001816 Translation elongation factor EFTs/EF1B 1 284 72.415283
Gene3D G3DSA:3.30.479.20 Elongation factor Ts, dimerisation domain IPR036402 Elongation factor Ts, dimerisation domain superfamily 56 143 5.4E-17
Gene3D G3DSA:1.10.286.20 - - - 184 232 4.6E-43
Gene3D G3DSA:3.30.479.20 Elongation factor Ts, dimerisation domain IPR036402 Elongation factor Ts, dimerisation domain superfamily 148 266 4.6E-43
SUPERFAMILY SSF54713 Elongation factor Ts (EF-Ts), dimerisation domain IPR036402 Elongation factor Ts, dimerisation domain superfamily 143 284 6.41E-49
NCBIfam TIGR00116 JCVI: translation elongation factor Ts IPR001816 Translation elongation factor EFTs/EF1B 1 284 4.2E-95
FunFam G3DSA:1.10.8.10:FF:000001 Elongation factor Ts - - 1 56 1.2E-24
Pfam PF00889 Elongation factor TS IPR014039 Translation elongation factor EFTs/EF1B, dimerisation 73 267 7.1E-59
SUPERFAMILY SSF54713 Elongation factor Ts (EF-Ts), dimerisation domain IPR036402 Elongation factor Ts, dimerisation domain superfamily 56 141 6.21E-14
CDD cd14275 UBA_EF-Ts - - 7 42 7.16387E-14
FunFam G3DSA:1.10.286.20:FF:000001 Elongation factor Ts - - 184 231 6.7E-16
SUPERFAMILY SSF46934 UBA-like IPR009060 UBA-like superfamily 3 56 2.35E-16
Gene3D G3DSA:1.10.8.10 - - - 1 55 5.7E-21
PANTHER PTHR11741 ELONGATION FACTOR TS IPR001816 Translation elongation factor EFTs/EF1B 5 275 8.9E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.