Pseudomonas aeruginosa PAO1, PA3703 (wspF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000876
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000876
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008984 protein-glutamate methylesterase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000876
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000156 phosphorelay response regulator activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000876
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000876
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chemotaxis Other PAO1 genes in this class
Transcriptional regulators Other PAO1 genes in this class
Motility & Attachment Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Chemotaxis ECO:0000037
not_recorded
PseudoCAP Chemosensory ECO:0000037
not_recorded
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52738 Methylesterase CheB, C-terminal domain IPR035909 Methylesterase CheB, C-terminal 151 334 1.96E-61
Pfam PF01339 CheB methylesterase IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 154 330 5.6E-57
Hamap MF_00099 Protein-glutamate methylesterase/protein-glutamine glutaminase [cheB]. IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 1 335 32.583981
PIRSF PIRSF000876 RR_chemtxs_CheB IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 1 335 5.2E-98
Gene3D G3DSA:3.40.50.180 - IPR035909 Methylesterase CheB, C-terminal 146 335 1.4E-65
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 104 9.53E-21
Gene3D G3DSA:3.40.50.2300 - - - 1 129 1.0E-21
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 4 102 3.3E-16
CDD cd16432 CheB_Rec IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 153 332 3.29997E-78
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1 118 6.3E-10
CDD cd17541 REC_CheB-like - - 1 124 3.33424E-48
PANTHER PTHR42872 PROTEIN-GLUTAMATE METHYLESTERASE/PROTEIN-GLUTAMINE GLUTAMINASE - - 1 334 2.7E-100

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.