Pseudomonas aeruginosa PAO1, PA3757 (nagR)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009893	positive regulation of metabolic process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	21169497	Reviewed by curator
Molecular Function	GO:0000976	transcription regulatory region sequence-specific DNA binding	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	21169497	Reviewed by curator
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:cd07377	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:cd07377	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07702	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00035	GntR bacterial regulatory protein HTH signature	IPR000524	Transcription regulator HTH, GntR	58	74	2.9E-9
Pfam	PF00392	Bacterial regulatory proteins, gntR family	IPR000524	Transcription regulator HTH, GntR	21	84	1.0E-16
SMART	SM00345	gntr3	IPR000524	Transcription regulator HTH, GntR	25	84	5.8E-16
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	13	85	4.8E-23
SMART	SM00866	UTRA_2	IPR011663	UbiC transcription regulator-associated	104	240	9.7E-33
Gene3D	G3DSA:3.40.1410.10	-	IPR028978	Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily	88	247	1.3E-38
PANTHER	PTHR44846	MANNOSYL-D-GLYCERATE TRANSPORT/METABOLISM SYSTEM REPRESSOR MNGR-RELATED	-	-	15	246	1.2E-55
SUPERFAMILY	SSF64288	Chorismate lyase-like	IPR028978	Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily	72	247	1.73E-43
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	16	87	1.13E-20
Pfam	PF07702	UTRA domain	IPR011663	UbiC transcription regulator-associated	106	240	2.6E-33
PRINTS	PR00035	GntR bacterial regulatory protein HTH signature	IPR000524	Transcription regulator HTH, GntR	44	58	2.9E-9
CDD	cd07377	WHTH_GntR	IPR000524	Transcription regulator HTH, GntR	20	85	5.49323E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.