Pseudomonas aeruginosa PAO1, PA3988 (lptE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0001530 lipopolysaccharide binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0ADC1
 ECO:0000250
sequence similarity evidence used in manual assertion		 24938785 Reviewed by curator
Biological Process GO:0015921 lipopolysaccharide export
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0ADC1
 ECO:0000250
sequence similarity evidence used in manual assertion		 24990751 Reviewed by curator
Biological Process GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04390
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04390
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF04390 Lipopolysaccharide-assembly IPR007485 LPS-assembly lipoprotein LptE 35 155 1.8E-9
PANTHER PTHR38098 LPS-ASSEMBLY LIPOPROTEIN LPTE IPR007485 LPS-assembly lipoprotein LptE 1 193 3.1E-56
MobiDBLite mobidb-lite consensus disorder prediction - - 166 207 -
Coils Coil Coil - - 164 194 -
Gene3D G3DSA:3.30.160.150 Lipoprotein like domain - - 18 183 2.4E-49
Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. IPR007485 LPS-assembly lipoprotein LptE 5 161 23.468245
FunFam G3DSA:3.30.160.150:FF:000003 LPS-assembly lipoprotein LptE - - 18 183 7.6E-114
MobiDBLite mobidb-lite consensus disorder prediction - - 169 196 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.