Pseudomonas aeruginosa PAO1, PA4050 (pgpA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0044255 | cellular lipid metabolic process | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
| Molecular Function | GO:0008962 | phosphatidylglycerophosphatase activity | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
1309518 | Reviewed by curator |
| Molecular Function | GO:0008962 | phosphatidylglycerophosphatase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF101307
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006629 | lipid metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:SSF101307
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | type I lipoteichoic acid biosynthesis (<i>S. aureus</i>) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| PseudoCyc | PHOSLIPSYN-PWY | superpathway of phospholipid biosynthesis I (bacteria) | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
| PseudoCAP | Glycerolipid metabolism |
ECO:0000037
not_recorded |
|||
| PseudoCyc | PWY0-1545 | cardiolipin biosynthesis III | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
| PseudoCyc | PWY-5668 | cardiolipin biosynthesis I | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
| KEGG | pae01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | cardiolipin biosynthesis I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | cardiolipin biosynthesis II | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | pae00564 | Glycerophospholipid metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101307 | YutG-like | IPR036681 | PgpA-like superfamily | 17 | 162 | 3.66E-46 |
| Pfam | PF04608 | Phosphatidylglycerophosphatase A | IPR007686 | YutG/PgpA domain | 25 | 162 | 1.2E-41 |
| PANTHER | PTHR36305 | PHOSPHATIDYLGLYCEROPHOSPHATASE A | IPR026037 | Phosphatidylglycerophosphatase A | 19 | 164 | 3.5E-63 |
| CDD | cd06971 | PgpA | IPR007686 | YutG/PgpA domain | 22 | 162 | 3.44458E-57 |
| PIRSF | PIRSF006162 | PgpA | IPR026037 | Phosphatidylglycerophosphatase A | 14 | 169 | 2.0E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.