Pseudomonas aeruginosa PAO1, PA4175 (piv)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 18203852 Reviewed by curator
Biological Process GO:0043952 protein transport by the Sec complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 18203852 Reviewed by curator
Molecular Function GO:0003824 catalytic activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0006554 lysine catabolic process
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 11237336 Reviewed by curator
Cellular Component GO:0005615 extracellular space
IDA
Inferred from Direct Assay 		ECO:0001230
mass spectrometry evidence used in manual assertion		 25488299 Reviewed by curator
Molecular Function GO:0008236 serine-type peptidase activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 11237336 Reviewed by curator
Biological Process GO:0006508 proteolysis
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 9642237 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Pyoverdine synthesis ECO:0000037
not_recorded
PseudoCAP Xcp type II secretion system ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 222 459 2.71E-34
PANTHER PTHR36234 LYSYL ENDOPEPTIDASE - - 33 458 3.1E-80
Gene3D G3DSA:2.40.10.10 - IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold 246 349 7.0E-46
Gene3D G3DSA:2.40.10.10 - IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold 221 449 7.0E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.