Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 1 | 84 | 8.39E-22 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 86 | 281 | 3.39E-30 |
CDD | cd08442 | PBP2_YofA_SoxR_like | - | - | 90 | 279 | 7.54571E-75 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 85 | 281 | 4.6E-37 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 88 | 3.0E-25 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 18 | 29 | 8.8E-7 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 89 | 272 | 1.8E-28 |
Coils | Coil | Coil | - | - | 22 | 42 | - |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 4 | 61 | 1.1E-18 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 168 | 258 | 1.8E-28 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 39 | 50 | 8.8E-7 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 29 | 39 | 8.8E-7 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 1 | 84 | 8.8E-22 |
PANTHER | PTHR30126 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 1 | 281 | 1.6E-73 |