Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006412 | translation | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
365581 | Reviewed by curator |
Biological Process | GO:0044267 | cellular protein metabolic process | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
Cellular Component | GO:0015934 | large ribosomal subunit |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002155
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006412 | translation |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002155
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003723 | RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002155
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003735 | structural constituent of ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002155
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pae03010 | Ribosome | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF00687 | Ribosomal protein L1p/L10e family | IPR028364 | Ribosomal protein uL1/ribosomal biogenesis protein | 34 | 220 | 6.6E-48 |
NCBIfam | TIGR01169 | JCVI: 50S ribosomal protein L1 | IPR005878 | Large ribosomal subunit protein uL1, bacterial-type | 3 | 228 | 5.7E-102 |
CDD | cd00403 | Ribosomal_L1 | IPR028364 | Ribosomal protein uL1/ribosomal biogenesis protein | 24 | 224 | 2.56431E-66 |
Gene3D | G3DSA:3.40.50.790 | - | IPR016095 | Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain | 68 | 159 | 3.8E-85 |
Gene3D | G3DSA:3.30.190.20 | - | - | - | 21 | 225 | 3.8E-85 |
PIRSF | PIRSF002155 | RPL1p_RPL1a_RPL10e_RPL1o | IPR002143 | Large ribosomal subunit protein uL1 | 1 | 227 | 4.3E-75 |
Hamap | MF_01318_B | 50S ribosomal protein L1 [rplA]. | IPR005878 | Large ribosomal subunit protein uL1, bacterial-type | 2 | 229 | 42.013737 |
SUPERFAMILY | SSF56808 | Ribosomal protein L1 | IPR023674 | Ribosomal protein uL1-like | 6 | 225 | 6.93E-79 |
PANTHER | PTHR36427 | 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL | - | - | 15 | 229 | 1.8E-78 |
FunFam | G3DSA:3.40.50.790:FF:000001 | 50S ribosomal protein L1 | - | - | 68 | 159 | 4.4E-39 |