Pseudomonas aeruginosa PAO1, PA4425

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1901135 carbohydrate derivative metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13580
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008968 D-sedoheptulose 7-phosphate isomerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00067
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0097367 carbohydrate derivative binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13580
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00540 Lipopolysaccharide biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd05006 SIS_GmhA IPR035461 GmhA/DiaA 11 190 2.21639E-99
PANTHER PTHR30390 SEDOHEPTULOSE 7-PHOSPHATE ISOMERASE / DNAA INITIATOR-ASSOCIATING FACTOR FOR REPLICATION INITIATION - - 3 194 6.8E-74
SUPERFAMILY SSF53697 SIS domain IPR046348 SIS domain superfamily 2 193 3.03E-58
Gene3D G3DSA:3.40.50.10490 - - - 1 197 8.8E-80
Pfam PF13580 SIS domain IPR001347 SIS domain 16 146 1.6E-32
Hamap MF_00067 Phosphoheptose isomerase [gmhA]. IPR004515 Phosphoheptose isomerase 2 192 37.872898

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.