Pseudomonas aeruginosa PAO1, PA4499 (psdR)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:2000879	negative regulation of dipeptide transport	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	18667554	Reviewed by curator
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47413	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.260.40	-	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	3	86	8.2E-14
FunFam	G3DSA:1.10.260.40:FF:000051	Probable transcriptional regulator	-	-	3	86	4.9E-57
CDD	cd00093	HTH_XRE	IPR001387	Cro/C1-type helix-turn-helix domain	7	64	5.36274E-11
Pfam	PF07883	Cupin domain	IPR013096	Cupin 2, conserved barrel	109	175	1.8E-17
SMART	SM00530	mbf_short4	IPR001387	Cro/C1-type helix-turn-helix domain	9	64	3.1E-8
CDD	cd02209	cupin_XRE_C	-	-	92	177	7.71185E-26
SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	3	69	5.07E-13
SUPERFAMILY	SSF51182	RmlC-like cupins	IPR011051	RmlC-like cupin domain superfamily	57	179	2.41E-27
PANTHER	PTHR46797	HTH-TYPE TRANSCRIPTIONAL REGULATOR	-	-	5	177	4.2E-27
Pfam	PF12844	Helix-turn-helix domain	IPR001387	Cro/C1-type helix-turn-helix domain	7	69	2.9E-8
Gene3D	G3DSA:2.60.120.10	Jelly Rolls	IPR014710	RmlC-like jelly roll fold	90	180	1.1E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.