Pseudomonas aeruginosa PAO1, PA4606

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Rho-independent transcription terminator TERM 1224 5166155 5166170 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Shine-Dalgarno sequence 5165866 5165868 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
AmrZ binding site 5165671 5165683 - ECO:0000314
direct assay evidence used in manual assertion
24603766 Details
AmrZ binding site 5164449 5164461 + ECO:0000314
direct assay evidence used in manual assertion
24603766 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: CGCGGGCCACGTC-N1-GACGTGGCCCGCG 5163496 5163522 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 1222 5163494 5163524 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Rho-independent transcription terminator TERM 1223 5163496 5163522 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details