Pseudomonas aeruginosa PAO1, PA4630
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0030638 | polyketide metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR38436
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | aclacinomycin biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | daunorubicin biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07366 | SnoaL-like polyketide cyclase | IPR009959 | Polyketide cyclase SnoaL-like | 15 | 134 | 1.8E-13 |
| NCBIfam | TIGR02096 | JCVI: ketosteroid isomerase-related protein | IPR011721 | Conserved hypothetical protein CHP02096 | 7 | 135 | 1.7E-42 |
| Gene3D | G3DSA:3.10.450.50 | - | - | - | 4 | 143 | 1.2E-21 |
| PANTHER | PTHR38436 | POLYKETIDE CYCLASE SNOAL-LIKE DOMAIN | IPR009959 | Polyketide cyclase SnoaL-like | 3 | 141 | 1.2E-15 |
| SUPERFAMILY | SSF54427 | NTF2-like | IPR032710 | NTF2-like domain superfamily | 3 | 142 | 5.7E-25 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.