Pseudomonas aeruginosa PAO1, PA4725 (cbrA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCCAGGCCAGCGCC-N5-GGCGCTGGCCTGGG | 5303684 | 5303716 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 5303839 | 5303842 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| -35 region | 5306831 | 5306836 | + |
|
11401699 | Details |
| -10 region | 5306854 | 5306859 | + |
|
11401699 | Details |
| transcriptional initiation site (+1) | 5306866 | 5306866 | + |
|
11401699 | Details |
| Inverted repeat: CCTGGGCCGG-N97-CCGGCCCAGG | 5304354 | 5304470 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: ATGCTGATCG-N45-CGATCAGCAT | 5304383 | 5304447 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GGGCCGGGCTG-N59-CAGCCCGGCCC | 5304894 | 5304974 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |