Pseudomonas aeruginosa PAO1, PA4731 (panD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0016540	protein autoprocessing	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	9169598	Reviewed by curator
Molecular Function	GO:0004068	aspartate 1-decarboxylase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06919	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006523	alanine biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06919	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae01110	Biosynthesis of secondary metabolites	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
PseudoCyc	PANTOSYN-PWY	pantothenate and coenzyme A biosynthesis I	19.5	ECO:0000250 sequence similarity evidence used in manual assertion	12867747
KEGG	pae01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
PseudoCAP		Beta-Alanine metabolism		ECO:0000037 not_recorded
KEGG	pae00410	beta-Alanine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
MetaCyc		β-alanine biosynthesis III	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
PseudoCAP		Alanine and Aspartate metabolism		ECO:0000037 not_recorded
PseudoCyc	PWY-5155	beta-alanine biosynthesis III	19.5	ECO:0000250 sequence similarity evidence used in manual assertion	12867747
KEGG	pae00770	Pantothenate and CoA biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd06919	Asp_decarbox	IPR003190	Aspartate decarboxylase	4	112	3.97677E-57
Hamap	MF_00446	Aspartate 1-decarboxylase [panD].	IPR003190	Aspartate decarboxylase	1	126	65.576706
Gene3D	G3DSA:2.40.40.20	-	-	-	1	126	7.2E-51
SUPERFAMILY	SSF50692	ADC-like	IPR009010	Aspartate decarboxylase-like domain superfamily	1	120	2.73E-46
NCBIfam	TIGR00223	JCVI: aspartate 1-decarboxylase	IPR003190	Aspartate decarboxylase	1	126	1.8E-46
PANTHER	PTHR21012	ASPARTATE 1-DECARBOXYLASE	IPR003190	Aspartate decarboxylase	1	124	2.6E-46
PIRSF	PIRSF006246	ADC	IPR003190	Aspartate decarboxylase	1	125	6.2E-50
Pfam	PF02261	Aspartate decarboxylase	IPR003190	Aspartate decarboxylase	1	114	3.5E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.