Pseudomonas aeruginosa PAO1, PA4765 (omlA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
translational start site (ATG) - alternative 5352076 5352078 -
8478325 Details
omlA promoter 5352096 5352145 +
9973334 Details
fur P2 promoter 5352117 5352166 -
9973334 Details
Shine-Dalgarno sequence 5352089 5352091 - ECO:0000256
match to sequence model evidence used in automatic assertion 		Details
Shine-Dalgarno sequence 5352162 5352164 + ECO:0000256
match to sequence model evidence used in automatic assertion 		Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
fur P1 promoter 5352289 5352338 -
9973334 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GAAAAAGCCCGGC-N4-GCCGGGCTTTTTC 5352723 5352752 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Rho-independent transcription terminator TERM 1304 5352722 5352753 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		17313685 Details
Rho-independent transcription terminator TERM 1305 5352723 5352752 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		17313685 Details
Rho-independent transcription terminator TERM 1306 5352729 5352746 - ECO:0000246
computational combinatorial evidence used in automatic assertion 		17313685 Details
Rho-independent transcription terminator TERM 1307 5352729 5352746 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		17313685 Details