Pseudomonas aeruginosa PAO1, PA4929
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.60.40.2380 | - | - | - | 81 | 227 | 3.6E-26 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 490 | 663 | 3.0E-59 |
| Pfam | PF07695 | 7TM diverse intracellular signalling | IPR011623 | 7TM-DISM receptor, extracellular domain, type 1 | 231 | 434 | 1.6E-37 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 497 | 655 | 4.55318E-66 |
| Coils | Coil | Coil | - | - | 435 | 455 | - |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 501 | 656 | 3.69E-50 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 492 | 656 | 5.6E-48 |
| PANTHER | PTHR46663 | DIGUANYLATE CYCLASE DGCT-RELATED | - | - | 436 | 663 | 4.5E-70 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 496 | 651 | 1.6E-48 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 485 | 657 | 3.5E-64 |
| Pfam | PF07696 | 7TMR-DISM extracellular 2 | IPR011622 | 7TM-DISM receptor, extracellular domain, type 2 | 86 | 219 | 2.5E-26 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 491 | 657 | 5.0E-47 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.