Pseudomonas aeruginosa PAO1, PA5040 (pilQ)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0043683	type IV pilus biogenesis	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	7901733	Reviewed by curator
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00263	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0019867	outer membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00965	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Pilin biosynthesis		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.30.1370.130	-	-	-	288	345	1.2E-24
SMART	SM00965	STN_2	IPR011662	Secretin/TonB, short N-terminal domain	306	354	1.4E-10
Pfam	PF00263	Bacterial type II and III secretion system protein	IPR004846	Type II/III secretion system	549	705	3.8E-49
PANTHER	PTHR30604	PROTEIN TRANSPORT PROTEIN HOFQ	-	-	6	706	0.0
Gene3D	G3DSA:3.30.1370.120	-	IPR038591	NolW-like superfamily	352	450	1.8E-22
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	580	590	9.4E-19
NCBIfam	TIGR02515	JCVI: type IV pilus secretin PilQ	IPR013355	Type IV pilus secretin PilQ	281	706	0.0
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	449	459	9.4E-19
Pfam	PF11741	AMIN domain	IPR021731	AMIN domain	38	122	3.9E-7
FunFam	G3DSA:3.30.1370.130:FF:000001	Type IV pilus secretin PilQ	-	-	288	346	3.2E-36
Gene3D	G3DSA:2.60.40.3470	-	-	-	144	266	1.2E-30
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	670	688	9.4E-19
Pfam	PF07660	Secretin and TonB N terminus short domain	IPR011662	Secretin/TonB, short N-terminal domain	307	353	1.7E-8
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	693	707	9.4E-19
Pfam	PF03958	Bacterial type II/III secretion system short domain	IPR005644	NolW-like	381	449	3.0E-15
PRINTS	PR00811	Bacterial general secretion pathway protein D signature	IPR001775	GspD/PilQ family	545	569	9.4E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.