Pseudomonas aeruginosa PAO1, PA5158

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1600.10 Outer membrane efflux proteins (OEP) - - 64 474 6.8E-112
Gene3D G3DSA:2.20.200.10 Outer membrane efflux proteins (OEP) - - 109 359 6.8E-112
Coils Coil Coil - - 230 257 -
PANTHER PTHR30203 OUTER MEMBRANE CATION EFFLUX PROTEIN - - 13 483 2.7E-99
Coils Coil Coil - - 439 459 -
NCBIfam TIGR01845 JCVI: efflux transporter outer membrane subunit IPR010131 RND efflux system, outer membrane lipoprotein, NodT 18 474 5.7E-125
Coils Coil Coil - - 401 421 -
Coils Coil Coil - - 300 320 -
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 9 478 5.75E-97
Coils Coil Coil - - 89 109 -
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 73 263 6.7E-23
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 296 472 2.2E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.