Pseudomonas aeruginosa PAO1, PA5167 (dctP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015740 C4-dicarboxylate transport
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 21725012 Reviewed by curator
Biological Process GO:0006835 dicarboxylic acid transport
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33376
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0030288 outer membrane-bounded periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00787
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP C(4)-dicarboxylate transport ECO:0000037
not_recorded
PseudoCAP  C(4)-dicarboxylate transport ECO:0000037
not_recorded
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00787 JCVI: DctP family TRAP transporter solute-binding subunit IPR004682 TRAP transporter solute receptor, DctP family 31 272 1.2E-81
PANTHER PTHR33376 - IPR018389 TRAP transporter solute receptor DctP 3 328 0.0
PIRSF PIRSF006470 DctB IPR004682 TRAP transporter solute receptor, DctP family 1 330 0.0
Gene3D G3DSA:3.40.190.170 - IPR038404 TRAP transporter solute receptor DctP superfamily 27 331 4.1E-101
FunFam G3DSA:3.40.190.170:FF:000001 TRAP dicarboxylate transporter, DctP subunit - - 26 328 0.0
Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 IPR018389 TRAP transporter solute receptor DctP 31 313 1.7E-114
CDD cd13674 PBP2_TRAP_SBP_like_1 - - 28 325 0.0
NCBIfam NF037995 NCBIFAM: TRAP transporter substrate-binding protein DctP - - 30 301 2.4E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.