Pseudomonas aeruginosa PAO1, PA5170 (arcD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| ArgR binding site | 5820785 | 5820826 | + |
|
1900277 | Details |
| Anr binding site | 5820831 | 5820844 | + |
|
1900277 | Details |
| -10 region | 5820867 | 5820872 | + |
|
1900277 | Details |
| transcriptional initiation site (+1) | 5820877 | 5820877 | + |
|
1900277 | Details |
| ANR binding site upstream of arcDABC operon | 5820819 | 5820863 | + |
|
1906871 | Details |
| arcDABC promoter | 5820835 | 5820884 | + |
|
1906871 | Details |
| arcD promoter region | 5820786 | 5820827 | - |
|
10198009 | Details |
| arc deleted region | 5820786 | 5820827 | + |
|
10198009 | Details |
| ArgR Box | 5820786 | 5820827 | + |
|
10198009 | Details |
| ANR box upstream of arc operon | 5820816 | 5820845 | + |
|
10198009 | Details |
| ArgR protected region upstream of the arc operon | 5820776 | 5820833 | + |
|
10198009 | Details |
| arcDABC promoter region | 5820832 | 5820882 | + |
|
1900277 | Details |
| ANR-binding at arcDABC | 5820832 | 5820861 | + |
|
1900277 | Details |
| OxyR binding site | 5820631 | 5820645 | - |
ECO:0000314
direct assay evidence used in manual assertion |
22275523 | Details |
| ArgR binding site | 5820786 | 5820827 | - |
ECO:0000314
direct assay evidence used in manual assertion |
18524913 | Details |
| NarL binding site | 5820817 | 5820823 | - |
ECO:0000314
direct assay evidence used in manual assertion |
18363796 | Details |
| Rho-independent transcription terminator TERM 1412 | 5820414 | 5820444 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 5820897 | 5820900 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |