Pseudomonas aeruginosa PAO1, PA5204 (argA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
OxyR binding site 5859684 5859698 + ECO:0000314
direct assay evidence used in manual assertion
22275523 Details
Inverted repeat: AAGCCTGTCG-N73-CGACAGGCTT 5859465 5859557 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CCTCGTTCGC-N23-GCGAACGAGG 5859743 5859785 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: GCTGACCAGC-N92-GCTGGTCAGC 5859855 5859966 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Shine-Dalgarno sequence 5859468 5859470 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Rho-independent transcription terminator TERM 1433 5858112 5858163 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Rho-independent transcription terminator TERM 1433 5858112 5858163 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Rho-independent transcription terminator TERM 1434 5858121 5858154 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details