Pseudomonas aeruginosa PAO1, PA5255 (algQ)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:1900192	positive regulation of single-species biofilm formation	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	2544550	Reviewed by curator
Biological Process	GO:0006355	regulation of transcription, DNA-templated	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	12706510	Reviewed by curator
Biological Process	GO:1900378	positive regulation of secondary metabolite biosynthetic process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	16030202	Reviewed by curator
Biological Process	GO:0045861	negative regulation of proteolysis	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	12706510	Reviewed by curator
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF016548	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Alginate biosynthesis		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PIRSF	PIRSF016548	Rsd_AlgQ	IPR007448	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ	1	155	2.2E-68
Gene3D	G3DSA:1.20.120.1370	Regulator of RNA polymerase sigma(70) subunit, domain 4	IPR038309	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ superfamily	1	153	1.2E-50
Pfam	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ	IPR007448	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ	1	145	2.5E-54

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.