Pseudomonas aeruginosa PAO1, PA5326 (sphD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0051872 sphingosine catabolic process
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
Biological Process GO:0051872 sphingosine catabolic process
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
24465209 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51419 PLP-binding barrel IPR029066 PLP-binding barrel 34 271 1.34E-19
CDD cd06814 PLPDE_III_DSD_D-TA_like_3 - - 20 402 0.0
PANTHER PTHR28004 ZGC:162816-RELATED - - 21 400 5.5E-34
Gene3D G3DSA:3.20.20.10 Alanine racemase IPR029066 PLP-binding barrel 35 267 1.0E-29
Pfam PF01168 Alanine racemase, N-terminal domain IPR001608 Alanine racemase, N-terminal 33 271 5.3E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.